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Data, Stats and Daily Numbers started 1st January 2022

992 replies

boys3 · 01/01/2022 18:49

Whilst I'd love to say all is quiet on New Years Day the reality is:

Welcome to yet another DATA thread.

Our preference is - still - for factual, data driven and analytical contributions.

Please try to keep discussion focused on these.

All the usual links below; New for '22 suggestions always welcome, and there may well be some that just need to go.

UK govt press conferences slides & data www.gov.uk/government/collections/slides-and-datasets-to-accompany-coronavirus-press-conferences#history
UKHSA Variants of Concern Technical Briefings www.gov.uk/government/publications/investigation-of-sars-cov-2-variants-technical-briefing
UKHSA Vaccine efficacy www.gov.uk/guidance/monitoring-reports-of-the-effectiveness-of-covid-19-vaccination
SAGE : Minutes and Models www.gov.uk/government/collections/scientific-evidence-supporting-the-government-response-to-coronavirus-covid-19
Data Dashboard coronavirus.data.gov.uk/ includes R estimates
UKHSA Weekly Flu & Covid Surveiilance Reports 2021-22 Season www.gov.uk/government/statistics/national-flu-and-covid-19-surveillance-reports-2021-to-2022-season
Dashboard Vaccine Map to MSOA level coronavirus.data.gov.uk/details/interactive-map/vaccinations
Covid 19 Genomics www.cogconsortium.uk/tools-analysis/public-data-analysis-2/
Sanger Genome Maps & Data covid19.sanger.ac.uk/lineages/raw
UCL Virus Watch ucl-virus-watch.net/
NHS Vaccination data www.england.nhs.uk/statistics/statistical-work-areas/covid-19-vaccinations/
Sewage www.gov.uk/government/publications/wastewater-testing-coverage-data-for-19-may-2021-emhp-programme/wastewater-testing-coverage-data-for-the-environmental-monitoring-for-health-protection-emhp-programme.
Sewage reports www.gov.uk/government/publications/monitoring-of-sars-cov-2-rna-in-england-wastewater-monthly-statistics-june-2021
Global vaccination data ourworldindata.org/covid-vaccinations
R estimates UK & English regions www.gov.uk/guidance/the-r-number-in-the-uk
Imperial UK weekly LAs, cases / 100k, table, map, hotspots statistics imperialcollegelondon.github.io/covid19local/#map
NHS England Hospital activity www.england.nhs.uk/statistics/statistical-work-areas/covid-19-hospital-activity/
NHS England Daily deaths www.england.nhs.uk/statistics/statistical-work-areas/covid-19-daily-deaths/
Cases Tracker England Local Government lginform.local.gov.uk/reports/view/lga-research/covid-19-case-tracker
ONS MSOA Map English deaths www.england.nhs.uk/statistics/statistical-work-areas/covid-19-daily-deaths/

Scot gov Daily data www.gov.scot/publications/coronavirus-covid-19-daily-data-for-scotland/
Scotland TravellingTabby LAs, care homes, hospitals, tests, t&t www.travellingtabby.com/scotland-coronavirus-tracker/
PH Wales LAs, cases, tests, deaths Dashboard public.tableau.com/profile/public.health.wales.health.protection#!/vizhome/RapidCOVID-19virology-Public/Headlinesummary
ICNRC Intensive Care National Audit & Research reports www.icnarc.org/Our-Audit/Audits/Cmp/Reports
NHS t&t England & UK testing Weekly stats www.gov.uk/government/collections/nhs-test-and-trace-statistics-england-weekly-reports
PHE Surveillance reports & LA Local Watchlist Maps by LSOA (from last summer) www.gov.uk/government/collections/nhs-test-and-trace-statistics-england-weekly-reports
ONS England infection surveillance report each Friday www.ons.gov.uk/peoplepopulationandcommunity/healthandsocialcare/conditionsanddiseases/bulletins/coronaviruscovid19infectionsurveypilot/previousReleases
Datasets for ONS surveillance reports www.ons.gov.uk/peoplepopulationandcommunity/healthandsocialcare/conditionsanddiseases/datasets/coronaviruscovid19infectionsurveydata/2020
ONS Roundup deaths, infections & economic reports www.ons.gov.uk/peoplepopulationandcommunity/healthandsocialcare/conditionsanddiseases/articles/coronaviruscovid19roundup/2020-03-26
Zoe UK data covid.joinzoe.com/data#interactive-map
ECDC (European Centre for Disease Control rolling 14-day incidence EEA & UK www.ecdc.europa.eu/en/cases-2019-ncov-eueea

Worldometer UK page www.worldometers.info/coronavirus/country/uk/
Our World in Data GB test positivity etc, DIY country graphs ourworldindata.org/coronavirus/country/united-kingdom?country=~GBR
FT DIY graphs compare deaths, cases, raw / million pop ig.ft.com/coronavirus-chart/?areas=eur&areas=usa&areas=bra&areas=gbr&areas=cze&areas=hun&areasRegional=usny&areasRegional=usnj&areasRegional=usaz&areasRegional=usca&areasRegional=usnd&areasRegional=ussd&cumulative=0&logScale=0&per100K=1&startDate=2020-09-01&values=deaths

PHE local health data fingertips.phe.org.uk/profile/health-profiles
Alama Personal COVID risk assessment alama.org.uk/covid-19-medical-risk-assessment/
Local Mobility Reports for countries www.google.com/covid19/mobility/
UK Highstreet Tracker for cities & large towns Footfall, spend index, workers, visitors, economic recovery www.centreforcities.org/data/high-streets-recovery-tracker/

OP posts:
Thread gallery
230
JanglyBeads · 07/01/2022 17:23

R4 PM Programme coming live from the Royal Berkshire Hospital in Reading. Just interviews Steve McManus the Chief Exec. Some of interesting stats: they currently have 96(?) covid patients, of whom 8 in ICU; 51 in virtual wards, I think in addition to the 96, they way he phrased it.

bordermidgebite · 07/01/2022 17:29

@the80sweregreat

Mark Drakeford sounded glum today. Always at odds with our PM and health secretary who play it down a lot more, yet they all have the same data and stats etc
The welsh NHS seems to have a less good reputation- if they have the same spend per head as the uk in general then it will be more under resourced as I understand wales to have a less healthy /older population , and being rural it's harder to move staff around/get bank staff than in London
herecomesthsun · 07/01/2022 17:52

Yes, I think health services are stretched quite thinly in Wales

treeflowercat · 07/01/2022 17:52

@DollyStardust

As your the data peeps, is there a vague formula to working out when my own area will peak? Modelling off London for example?
I think the unknown impact of schools' return after New Year makes reliable forecasts based on current data next to impossible.
Regulus · 07/01/2022 17:57

Is there any data regarding how many people in an average year have a respiratory disease that results in hospitalisation? Apologies not really relevant to the thread but will be immeasurably helpful to my current situation.

JanglyBeads · 07/01/2022 18:55

Is that not in the ONS stats, respiratory viruses?

Choconuttolata · 07/01/2022 18:57

Data on vaccine effectiveness against Delta Vs Omicron and booster effectiveness against infection with Omicron from Ontario, link to pre-print paper at bottom of article.

Their data suggests third dose 37% effective against infection with Omicron.

Unfortunately they didn't include people with 2 prior doses of ChAdOx1 due to presumed low effectiveness based on other data. They only included if mixed schedule vaccinated with ChAdOx1 and an mRNA vaccine.

It would have been interesting to see that data on effectiveness given so many in the UK have had 2 doses of ChAdOx1 prior to mRNA booster.

hospitalhealthcare.com/covid-19/third-covid-19-vaccine-dose-37-effective-against-omicron-after-7-days/

Choconuttolata · 07/01/2022 19:02

www.england.nhs.uk/statistics/statistical-work-areas/winter-daily-sitreps/winter-daily-sitrep-2018-19-data/

You might find some comparable hospital data here.

sirfredfredgeorge · 07/01/2022 19:26

BTW, I don't think people mis-representing data is "being cautious", it's misrepresenting data, you can combine that with reasons why it might not be true, but misrepresenting predictions and data is not the clear, unambiguous, information provision that every bit of research says is essential in public health messaging.

"It could peak any time from 5 to 20 days in Wales, we just don't know exactly, but it's certainly still rising now" would be a good message. 10-14 days is the same bad sort of message as 2million cases a day or 6000 deaths or other extreme ends of the possible scenarios being presented to the public as the single one.

@DollyStardust Predicting your local area is not that easy, because every area tends to detect more or less cases depending on local issues. It seems that the more unhealthy (health deprivation score) or more "student" the local council is the higher the detected rate, so if you're in an unhealthy area or a student area it'll be a higher overall number (cases in whole pandemic) so you might be able to get an idea with that, So Knowsley (deprived) is possibly not yet peaking despite having had 28% of the population detected cases, whereas many London have at 22% or 23% This complicates things on predicting individual area - especially if there is also some other local issue like big employers having specific testing regimes etc.

One I think I'd say is that no areas can sustain a rate over 4000 in there young adults for more than a week and they'll likely start falling first. However schools are back now so things could change there too. Basically all too tricky.

R4 PM Programme coming live from the Royal Berkshire Hospital in Reading. Just interviews Steve McManus the Chief Exec. Some of interesting stats: they currently have 96(?) covid patients, of whom 8 in ICU; 51 in virtual wards, I think in addition to the 96, they way he phrased it

Hmm, Latest data was 75 "all covid patients" and 5 in ICU for the royal Berkshire trust, I assume the hospital doesn't cover two trusts, but that doesn't really help us answer if the virtual wards are in addition, as even the 75 doesn't tally with the 96, but maybe it says that virtual aren't counted, and there was an alarming number of admissions today?

sirfredfredgeorge · 07/01/2022 20:42

Denmark apparently not peaked, so was some reporting question over new year. Now at a rate well higher than London's got even remembering they include reinfections which London doesn't, but still given the current 7 day is over 6600 which is beginning to push the ONS's 9% number for London and that's if they detect every case (remember ONS testing positive is different to the 7 day rate although it's never clearly established what they use I don't think)

Denmark still more vaccinated and boosted more and continuing faster than the UK.

Netherlands is about to overcome their previous record case numbers despite being in near full lockdown.

Healthcare and deaths not looking bad anywhere though, despite the case rates.

Canada is dropping, but I think that's just straight up capacity and change in criteria for testing.

wintertravel1980 · 07/01/2022 21:00

Denmark’s trajectory and London peaking at 9% with relatively low vaccination levels might suggest that the historic wild type infection offers some degree of protection from Omicron.

I am also guessing that Delta protection might be the least powerful since both NE and NW are getting hit harder than London (post their very recent Delta waves).

sirfredfredgeorge · 07/01/2022 21:31

If original was more effective against though, then you would've also thought the vaccine would be more effective (this is the antigenic sin theory isn't it?)

I do suspect the North has higher detection rates than London (possibly related to the generally higher health deprivation I mentioned earlier), but that would need to peak pretty soon in the north to just be a detection rate difference.

bordermidgebite · 07/01/2022 21:49

My understanding is The vaccine is only a snapshot of part of the virus -so it could be possible that the first version of the virus had features not in the associated vaccine that the immune system has seen ?

sirfredfredgeorge · 07/01/2022 22:00

I think we're just speculating really! Italy (more original, little delta) certainly showing no sign of stopping it's omicron wave. Netherlands, loads of recent delta, rising fast despite full lockdown.

Too mixed to say I guess, re-infection stats with time period between would be the hint, but I don't know anywhere that showed that - there was a SA paper, generally showed re-infections from all but didn't specifically break it down, and detection rates are obviously different in each.

JanglyBeads · 07/01/2022 23:05

Today's iSAGE meeting - there’s no point in locking down now (which chimes with what SAGE forecast in December).

“Now it's about reducing the "comedown wave" as fast as possible through:
communication (symptoms, airborne)
protection (clean air, masks, vax)
support (isolation, clean air, (for) industry)”

twitter.com/chrischirp/status/1479535597559635973?s=21

sirfredfredgeorge · 08/01/2022 07:42

Did they say what the benefit or harm would've been had England had their previous advice had been followed and there had been a full lockdown in December?

Piggywaspushed · 08/01/2022 08:04

There is some interesting data there jangly. Thanks for sharing.

Neurodiversitydoctor · 08/01/2022 08:15

Link is not working for me Jangley any chance of a screen shot ?

containsnuts · 08/01/2022 08:17

@Regulus

Is there any data regarding how many people in an average year have a respiratory disease that results in hospitalisation? Apologies not really relevant to the thread but will be immeasurably helpful to my current situation.
www.bbc.co.uk/news/health-59909860

"Traditionally winter would see around 1,000 admissions a day for all types of respiratory infections.

Currently the NHS is seeing more than double that for Covid alone - although a chunk admittedly are people who are ill with something else, such as broken arms, strokes and cancer for example, and may well have come in anyway.

But even if you discount these patients, you are still well above the 1,000 threshold."

lonelyplanet · 08/01/2022 13:12

Here's a balanced summary of the hospital situation:
mobile.twitter.com/rupert_pearse/status/1479714867145854976

JanglyBeads · 08/01/2022 14:28

Sorry @Neurodiversitydoctor. Hmm a bit much to screen shot, wil try and find main points!

JanglyBeads · 08/01/2022 14:31

C Pagel yesterday following iSAGE meeting

THREAD on UK Covid situation:

TLDR: not over yet. Good news is high booster coverage in over 50s & no rise in ICU. Bad news is high strain on hospitals, no plan for schools & worsening admissions & long covid for kids. 1

By age (England), we have excellent booster coverage in over 60s - this is making big difference to admissions and is why e.g. N America in harder situation. BUT plenty of unboosted younger adults left and kids have v little vax protection. 5

Data, Stats and Daily Numbers started 1st January 2022
JanglyBeads · 08/01/2022 14:33

Reinfections

JanglyBeads · 08/01/2022 14:39

Long covid and admissions rising in kids, and to some extent their parents:

JanglyBeads · 08/01/2022 14:41

Graph - NB Pre omicron:

Data, Stats and Daily Numbers started 1st January 2022